ARE-R

“AU Rich Elements in Oryza Sativa Japonica ”

ARE-SITES in chromosome 10

    1.Os10g0527100
    Os10g0527100 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (20935452..20938671, complement)
    ID: 4349180
    No.of AUUUA pentamer in 3'UTR: 7

    2.Os10g0400900
    Os10g0400900 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (13900843..13909622)
    ID: 4348567
    No.of AUUUA pentamer in 3'UTR: 5(atleast one motif out of 5 is present in PAS region)

    3.Os10g0427900
    Os10g0427900 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (15678019..15680328, complement)
    ID: 4348682
    No.of AUUUA pentamer in 3'UTR: 3

    4.Os10g0471400
    Os10g0471400 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (17942111..17948017, complement)
    ID: 4348871
    No.of AUUUA pentamer in 3'UTR: 2(extendable upto nanomer)

    5.Os10g0393100
    Os10g0393100 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (13470141..13472616, complement)
    ID: 4348538
    No.of AUUUA pentamer in 3'UTR: 2(extendable upto nanomer)

    6.Os10g0533000
    Os10g0533000 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (21180332..21186281)
    ID: 4349220
    No.of AUUUA pentamer in 3'UTR: 2(extendable upto nanomer)

    7.Os10g0566300
    Os10g0566300 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (22880954..22883016)
    ID: 4349423
    No.of AUUUA pentamer in 3'UTR: 2

    8.Os10g0563700
    Os10g0563700 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (22713301..22715711, complement)
    ID: 4349403
    No.of AUUUA pentamer in 3'UTR: 2

    9.Os10g0548800
    Os10g0548800 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (21928876..21932522, complement)
    ID: 4349303
    No.of AUUUA pentamer in 3'UTR: 2

    10.Os10g0530900
    Os10g0530900 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (21089175..21090222)
    ID: 4349207
    No.of AUUUA pentamer in 3'UTR: 2

    11.Os10g0528900
    Os10g0528900 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (21030119..21031397)
    ID: 4349191
    No.of AUUUA pentamer in 3'UTR: 2

    12.Os10g0525400
    Os10g0525400 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (20887287..20888474, complement)
    ID: 4349167
    No.of AUUUA pentamer in 3'UTR: 2

    13.Os10g0518800
    Os10g0518800 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (20516195..20525816)
    ID: 4349130
    No.of AUUUA pentamer in 3'UTR: 2

    14.Os10g0503500
    Os10g0503500 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (19675797..19681221)
    ID: 4349051
    No.of AUUUA pentamer in 3'UTR: 2

    15.Os10g0412700
    Os10g0412700 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (14756590..14758091, complement)
    ID: 4348612
    No.of AUUUA pentamer in 3'UTR: 2

    16.Os10g0346300
    Os10g0346300 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (10647945..10653685, complement)
    ID: 4348374
    No.of AUUUA pentamer in 3'UTR: 2

    17.Os10g0210500
    Os10g0210500 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (7593289..7599715, complement)
    ID: 4348283
    No.of AUUUA pentamer in 3'UTR: 2

    18. Os10g0191900
    Os10g0191900 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (6084828..6086490)
    ID: 4348238
    No.of AUUUA pentamer in 3'UTR: 2

    19.Os10g0105400
    Os10g0105400[Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (385775..395056, complement)
    ID: 4347955
    No.of AUUUA pentamer in 3'UTR: 2

    20.Os10g0548600
    Os10g0548600 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (21920288..21922067)
    ID: 4349301
    No.of AUUUA pentamer in 3'UTR: 2( present in PAS region)

    21.Os10g0521500
    Os10g0521500 [Oryza sativa Japonica Group]
    Other Designations: hypothetical protein
    Chromosome: 10
    Annotation: Chromosome 10, NC_008403.2 (20636956..20640675)
    ID: 4349145
    No.of AUUUA pentamer in 3'UTR: 2( present in PAS region)

    Genes containing only 1 AUUUA motif