Project titles for:
Project titles for: 2008-10
- In silico analysis of Larger subunit of AGPase in Rice and Maize
- In silico Analysis of mutated in Larger subunit of AGPase in Maize
- Structural Comparison of Betaine Aldehyde Dehydrogenase-1 of Barley and Rice
- Analysis of Gene Expression Database of Skin Cancer
- Evaluation of Sequence Alignment Tools
- Phylogenetic analysis of Drb 3.2 gene
- Modelling of Smaller subunit of AGPase in Rice and Maize
- Prediction of Protein structure from sequence
- Development of Clinical Information Database of domestic animals
- To identify distant relationship between flavoprotein superfamily
- Promoters comparison in bacteria
- Transport protein features analysis
- Genome deciphering and comparative genomics of Solanaceous genome
- Computational approach in deciphering effect of gene alteration in Arabidopsis Thaliana
- Simulation of conformational changes in protein
Recent progress in understanding the phylogeny of the economically important plant family Solanaceae makes this an ideal time to develop models for linking the new data on plant genomics with the huge diversity of naturally occurring species in the family. Phylogenetics provides the framework with which to investigate these linkages but, critically, good species-level descriptive resources for the Solanaceae community are currently missing. working with Solanaceae has a unique opportunity to effectively link genomics and taxonomy for better understanding of this important family, taking plant biology to a new level for the next century. Among angiosperm families, the Solanaceae rank as one of the most important to human beings. Species of the family are used for food and as Ornamentals. The family is a medium-sized one with approximately 90 genera and 3000–4000 species, almost of half of which are in the large and diverse genus Solanum. In this project work is carried out with the help of one tool CLC genome workbench and two servers VISTA genome browser and CG view server. The VISTA genome browser gives the information about the conserved regions presents in the genome. And give phylogenetic tree gives information about the molecular evolution of the six Solanaceae species.CG View servers gives the circular visualization of the genomes containing the data lanes in different colours telling about ORFs,start and stop codons ,GC skew+ and GC skew -, GC content. The CLC Genome workbench gives the statistics about the length, GC content,% coding, topology, no. of genes, psedo-genes, no. of structural RNA, no. of C+G, no. of A+T.