Project titles for:
Project titles for: 2006-08
- Detection of putative miRNA sequences in rice genome
- QSAR Studies on Tuberculosis Inhibitors
- Eigenvalue analysis and its applications in Bioinformatics
- Parallel Implementation of DOCK Algorithm
- Comparative Analysis of Protein Classification Methods
- Identification of Neuraminidase inhibitors of Influenza virus
- Identification of Transcription factor binding sites in yeast
- Restriction site analysis of Rice genome
- Docking Studies on Tuberculosis Inhibitors
- Determination of sequence homology in promoter region for abiotic stress responsive genes in rice
- SNP mining in Chromosome no.8 of rice
- Annotation of EST Sequences present on Chromosome no. 1, 4 & 8 of Rice
- Function Prediction for genes near BAD-2 locus on Chromosome no. 8 of Rice
- Computational Prediction of Putative miRNA Candidates in Malarial Parasite Genome
- Multimedia database of fungal diseases in Rice and Wheat
- GePre: A Gene Prediction Tool
- SEALI: A Sequence Alignment Tool
- Tannase Structure Prediction
- Algorithms on PAM and BLOSUM Matrices
Rice is a staple food in much of the world and hence increasing its production is of special interest. Its productivity is severely affected by soil salinity, drought, low and high temperature and other abiotic stress condition. Nucleotide sequences of 88 genes (Table1) which are responsible for abiotic stress in rice were retrieved from Map Viewer and ENTREZ nucleotide database of NCBI and other rice databases. By different tool like Dragon promoter, finder, promoter, Scan and Softberry promoter region for these genes were found .By multiple alignment sequence homology has been observed in the promoter region of abiotic stress related genes, heat, water, and drought and ABA responsive genes as shown in Figure 3, 4, 5, and 6 respectively.